Microbiome interactions shape host fitness

Alison L. Gould, Vivian Zhang, Lisa Lamberti, Eric W. Jones, Benjamin Obadia, Nikolaos Korasidis, Alex Gavryushkin, Jean M. Carlson, Niko Beerenwinkel, and William B. Ludington

This is a collection of articles that reference the PNAS publication "Microbiome interactions shape host fitness", available at https://doi.org/10.1073/pnas.1809349115

Each figure of the paper is here with clickable links in context that link to each of the analyses performed.

Each of the computational analyses presented are the actual analysis used in the paper to process the data, analyze the results, and create the figures that are displayed in the journal article.

The authors of this paper invite fellow researchers to remix each of these articles so that they can rerun, experiment with, and reuse elements of this analysis in their own work.

Super-resolution image of fly gut colonized by Lactobacillus (red) and Acetobacter (green) bacteria. Fly cell nuclei appear blue. Image credit: Benjamin Obadia