NextjournalLongReadNGS environment
This is a Julia environment with a set of already-installed packages that are useful for long-read NGS data processing.
#= #This is what was originally run to install and load the packages. using Pkg Pkg.add.(["Statistics","PyPlot"]) Pkg.add(PackageSpec(name="NextGenSeqUtils", rev="1.0", url = "https://github.com/MurrellGroup/NextGenSeqUtils.jl.git")) Pkg.add(PackageSpec(name="DPMeansClustering", rev="1.0", url = "https://github.com/MurrellGroup/DPMeansClustering.jl.git")) Pkg.add(PackageSpec(name="RobustAmpliconDenoising", rev="1.0", url = "https://github.com/MurrellGroup/RobustAmpliconDenoising.jl.git")) =# using Statistics, PyPlot, NextGenSeqUtils, DPMeansClustering, RobustAmpliconDenoising